EnhancerDB
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  3. rs541969824[chr19:3385562]
Enhancers that have rs541969824[chr19:3385562]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3362205 3392371 enh17862
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Cervix (HeLa-S3) Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541969824[chr19:3385562]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3385543 3385563 RREB1 JASPAR yes 112126460
chr19 3385544 3385564 RREB1 JASPAR yes 112126461
chr19 3385545 3385565 RREB1 JASPAR yes 112126463
chr19 3385548 3385568 RREB1 JASPAR yes 112126464
chr19 3385549 3385569 RREB1 JASPAR yes 112126465
chr19 3385551 3385566 RUNX2 JASPAR yes 112126466
chr19 3385553 3385573 RREB1 JASPAR yes 112126467
chr19 3385556 3385576 RREB1 JASPAR yes 112126468
chr19 3385559 3385579 RREB1 JASPAR yes 112126469
Genes associated with rs541969824[chr19:3385562], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More