EnhancerDB
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  3. rs541972320[chr12:123553172]
Enhancers that have rs541972320[chr12:123553172]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123537905 123558786 enh15079
Brain (SK-N-MC) Liver Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs541972320[chr12:123553172]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123553158 123553173 NR2C2 JASPAR yes 124315572
chr12 123553166 123553180 EBF1 JASPAR yes 124315574
chr12 123553167 123553178 EBF1 JASPAR yes 124315575
chr12 123553167 123553180 TFAP2A JASPAR yes 124315576
Genes associated with rs541972320[chr12:123553172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More