EnhancerDB
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  3. rs541978897[chr13:111846206]
Enhancers that have rs541978897[chr13:111846206]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 111812424 111849400 enh3020
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Heart
Transcript factors that have rs541978897[chr13:111846206]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 111846196 111846213 PAX1 JASPAR yes 60392975
chr13 111846196 111846213 PAX9 JASPAR yes 60392976
chr13 111846197 111846211 PAX6 JASPAR yes 60392977
chr13 111846197 111846216 PAX5 JASPAR yes 60392978
chr13 111846206 111846211 NFY TRANSFAC yes 60392979
Genes associated with rs541978897[chr13:111846206], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More