EnhancerDB
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  3. rs542017213[chr1:113176351]
Enhancers that have rs542017213[chr1:113176351]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113174365 113185519 enh568
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (A549) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Blood (T-cell) Stomach
Transcript factors that have rs542017213[chr1:113176351]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113176335 113176356 IRF1 JASPAR yes 31583027
chr1 113176337 113176352 STAT2 JASPAR yes 31583028
chr1 113176339 113176360 ZNF263 JASPAR yes 31583029
Genes associated with rs542017213[chr1:113176351], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More