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- rs542034051[chr17:78998685]
Enhancers that have rs542034051[chr17:78998685]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
78989925 |
79003875 |
enh17432 |
|
|
Transcript factors that have rs542034051[chr17:78998685]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
78998275
|
78998984
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21797496
|
|
|
chr17
|
78998276
|
78998956
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21797497
|
|
|
chr17
|
78998327
|
78999601
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21797498
|
|
|
chr17
|
78998340
|
78999394
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21797499
|
|
|
chr17
|
78998442
|
78998770
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21797500
|
|
|
chr17
|
78998672
|
78998685
|
NFKB1
|
JASPAR
|
yes
|
|
56298456
|
|
|
chr17
|
78998672
|
78998685
|
NFKB2
|
JASPAR
|
yes
|
|
56298457
|
|
Genes associated with rs542034051[chr17:78998685], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |