EnhancerDB
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  3. rs542078212[chr17:25710522]
Enhancers that have rs542078212[chr17:25710522]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25701625 25717335 enh32152
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Liver Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Thyroid Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs542078212[chr17:25710522]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25710505 25710523 NFYA JASPAR yes 53626791
chr17 25710508 25710524 NFYA JASPAR yes 53626793
chr17 25710511 25710526 NFYB JASPAR yes 53626794
chr17 25710519 25710533 PLAG1 JASPAR yes 53626796
Genes associated with rs542078212[chr17:25710522], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More