EnhancerDB
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  3. rs542108547[chr3:189759066]
Enhancers that have rs542108547[chr3:189759066]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 189740805 189764249 enh21215
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Peripheral Blood (MM.1S) Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs542108547[chr3:189759066]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 189759060 189759075 FOXP1 JASPAR yes 8613919
chr3 189759061 189759076 FOXP1 JASPAR yes 8613920
chr3 189759062 189759068 TBP TRANSFAC yes 8613921
chr3 189759062 189759077 FOXP1 JASPAR yes 8613922
chr3 189759062 189759083 IRF1 JASPAR yes 8613923
chr3 189759063 189759078 FOXP1 JASPAR yes 8613924
chr3 189759063 189759084 IRF1 JASPAR yes 8613925
chr3 189759064 189759079 FOXP1 JASPAR yes 8613926
chr3 189759064 189759085 IRF1 JASPAR yes 8613927
chr3 189759065 189759080 FOXP1 JASPAR yes 8613928
chr3 189759065 189759086 IRF1 JASPAR yes 8613929
chr3 189759066 189759081 FOXP1 JASPAR yes 8613930
chr3 189759066 189759087 IRF1 JASPAR yes 8613931
Genes associated with rs542108547[chr3:189759066], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More