EnhancerDB
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  3. rs542138908[chr17:77971946]
Enhancers that have rs542138908[chr17:77971946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77955405 77983735 enh17427
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Blood (T-cell) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs542138908[chr17:77971946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77971925 77971946 IRF1 JASPAR yes 56236387
chr17 77971926 77971947 IRF1 JASPAR yes 56236389
chr17 77971927 77971948 IRF1 JASPAR yes 56236391
chr17 77971928 77971949 IRF1 JASPAR yes 56236393
chr17 77971929 77971950 IRF1 JASPAR yes 56236395
chr17 77971930 77971951 IRF1 JASPAR yes 56236397
chr17 77971931 77971946 FOXP1 JASPAR yes 56236398
chr17 77971931 77971952 IRF1 JASPAR yes 56236399
chr17 77971932 77971947 FOXP1 JASPAR yes 56236400
chr17 77971933 77971954 IRF1 JASPAR yes 56236401
chr17 77971934 77971949 FOXP1 JASPAR yes 56236402
chr17 77971936 77971951 FOXP1 JASPAR yes 56236403
chr17 77971946 77971961 FOXP1 JASPAR yes 56236404
chr17 77971946 77971967 IRF1 JASPAR yes 56236405
Genes associated with rs542138908[chr17:77971946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More