EnhancerDB
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  3. rs542162426[chr2:216716641]
Enhancers that have rs542162426[chr2:216716641]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 216688425 216718115 enh6146
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Ovary Blood (OCI-LY7) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542162426[chr2:216716641]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 216716639 216716649 ALX3 JASPAR yes 80814205
chr2 216716639 216716649 EMX1 JASPAR yes 80814206
chr2 216716639 216716649 EMX2 JASPAR yes 80814207
chr2 216716639 216716649 EVX1 JASPAR yes 80814208
chr2 216716639 216716649 EVX2 JASPAR yes 80814209
chr2 216716639 216716649 GBX2 JASPAR yes 80814210
chr2 216716639 216716649 GSX1 JASPAR yes 80814211
chr2 216716639 216716649 GSX2 JASPAR yes 80814212
chr2 216716639 216716649 HOXB2 JASPAR yes 80814213
chr2 216716639 216716649 HOXB3 JASPAR yes 80814214
chr2 216716639 216716649 LHX6 JASPAR yes 80814215
chr2 216716639 216716649 MEOX2 JASPAR yes 80814216
chr2 216716639 216716649 MNX1 JASPAR yes 80814217
chr2 216716640 216716648 DLX6 JASPAR yes 80814218
chr2 216716640 216716648 EN1 JASPAR yes 80814219
chr2 216716640 216716648 LBX1 JASPAR yes 80814220
chr2 216716640 216716648 PAX4 JASPAR yes 80814221
chr2 216716640 216716648 PDX1 JASPAR yes 80814222
chr2 216716640 216716648 VAX1 JASPAR yes 80814223
chr2 216716640 216716648 VAX2 JASPAR yes 80814224
chr2 216716640 216716648 VSX1 JASPAR yes 80814225
chr2 216716640 216716648 VSX2 JASPAR yes 80814226
chr2 216716641 216716652 PHOX2A JASPAR yes 80814227
chr2 216716641 216716652 PROP1 JASPAR yes 80814228
Genes associated with rs542162426[chr2:216716641], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More