EnhancerDB
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  3. rs542178140[chr3:11229654]
Enhancers that have rs542178140[chr3:11229654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 11221005 11232959 enh20322
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Ovary Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myotube) Uterus Heart
Transcript factors that have rs542178140[chr3:11229654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 11229649 11229659 TBX21 JASPAR yes 402353
chr3 11229649 11229660 TBX20 JASPAR yes 402354
chr3 11229649 11229662 EOMES JASPAR yes 402355
Genes associated with rs542178140[chr3:11229654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More