EnhancerDB
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  3. rs542179680[chr3:9389077]
Enhancers that have rs542179680[chr3:9389077]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 9386845 9398579 enh20314
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Lung (PC-9) Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs542179680[chr3:9389077]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 9389073 9389077 LFA1 TRANSFAC yes 345906
chr3 9389074 9389095 IRF1 JASPAR yes 345907
chr3 9389076 9389091 STAT2 JASPAR yes 345908
chr3 9389077 9389091 STAT1 JASPAR yes 345909
Genes associated with rs542179680[chr3:9389077], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More