EnhancerDB
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  3. rs542193085[chr17:76932015]
Enhancers that have rs542193085[chr17:76932015]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76924065 76939144 enh17419
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542193085[chr17:76932015]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76931463 76933661 TCF7L2 GTRD no Colon (HCT116) 21795410
chr17 76931511 76932095 TCF7L2 GTRD no Colon (HCT116) 21795411
chr17 76931671 76932124 ZNF143 GTRD no Epithelial (MCF-7) 21795412
chr17 76931854 76932514 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21795413
chr17 76931999 76932019 RREB1 JASPAR yes 56190416
chr17 76932000 76932020 RREB1 JASPAR yes 56190417
chr17 76932002 76932022 RREB1 JASPAR yes 56190418
chr17 76932007 76932021 PLAG1 JASPAR yes 56190419
chr17 76932013 76932023 ZNF740 JASPAR yes 56190420
Genes associated with rs542193085[chr17:76932015], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More