EnhancerDB
  1. Home
  2. SNP
  3. rs542194552[chr18:56228264]
Enhancers that have rs542194552[chr18:56228264]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56213245 56242835 enh4870
Astrocyte Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542194552[chr18:56228264]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56228254 56228267 EOMES JASPAR yes 110959366
chr18 56228256 56228266 TBR1 JASPAR yes 110959367
chr18 56228258 56228266 MGA JASPAR yes 110959368
chr18 56228258 56228266 TBX15 JASPAR yes 110959369
chr18 56228258 56228266 TBX1 JASPAR yes 110959370
chr18 56228258 56228266 TBX4 JASPAR yes 110959371
chr18 56228258 56228266 TBX5 JASPAR yes 110959372
Genes associated with rs542194552[chr18:56228264], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More