EnhancerDB
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  3. rs542205646[chr18:56227013]
Enhancers that have rs542205646[chr18:56227013]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56213245 56242835 enh4870
Astrocyte Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542205646[chr18:56227013]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56226998 56227013 HNF4G JASPAR yes 110959201
chr18 56227001 56227022 MAFG JASPAR yes 110959202
Genes associated with rs542205646[chr18:56227013], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More