EnhancerDB
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  3. rs542235027[chr1:228966211]
Enhancers that have rs542235027[chr1:228966211]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs542235027[chr1:228966211]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228965971 228966447 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388824
chr1 228966207 228966217 MAX JASPAR yes 35933155
chr1 228966207 228966218 USF1 JASPAR yes 35933156
chr1 228966207 228966218 USF2 JASPAR yes 35933157
Genes associated with rs542235027[chr1:228966211], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More