EnhancerDB
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  3. rs542242986[chr1:202007392]
Enhancers that have rs542242986[chr1:202007392]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs542242986[chr1:202007392]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 21365535
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 107857423
chr1 202005749 202008651 ZNF274 GTRD no Bone Marrow (K562) 107857424
chr1 202006583 202008707 ZNF143 GTRD no Epithelial (MCF-7) 21365575
chr1 202006583 202008707 ZNF143 GTRD no Epithelial (MCF-7) 107857425
chr1 202006677 202008490 ZNF274 GTRD no Bone Marrow (K562) 107857426
chr1 202006897 202008937 ZNF274 GTRD no Bone Marrow (K562) 107857427
chr1 202007015 202008445 ZBTB33 GTRD no Lung (A549) 107857428
chr1 202007132 202008772 ZNF274 GTRD no Bone Marrow (K562) 107857429
chr1 202007155 202008962 ZNF274 GTRD no Cervix (HeLa-S3) 21365578
chr1 202007155 202008962 ZNF274 GTRD no Cervix (HeLa-S3) 107857430
chr1 202007165 202008553 ZBTB33 GTRD no Lung (A549) 107857431
chr1 202007217 202008351 ZNF274 GTRD no Bone Marrow (K562) 107857432
chr1 202007262 202008554 ZNF274 GTRD no Bone Marrow (K562) 107857433
chr1 202007382 202007395 NR2F1 JASPAR yes 34544778
chr1 202007386 202007403 RARA JASPAR yes 34544779
chr1 202007386 202007403 RXRA JASPAR yes 34544780
chr1 202007387 202007408 ZNF263 JASPAR yes 34544781
chr1 202007390 202007411 ZNF263 JASPAR yes 34544782
Genes associated with rs542242986[chr1:202007392], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More