EnhancerDB
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  3. rs542274877[chr1:10949007]
Enhancers that have rs542274877[chr1:10949007]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10948885 10972333 enh11498
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs542274877[chr1:10949007]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10949004 10949023 CTCF JASPAR yes 26756709
chr1 10949006 10949011 SP1 TRANSFAC yes 26756710
chr1 10949007 10949019 TFAP2A JASPAR yes 26756711
chr1 10949007 10949019 TFAP2B JASPAR yes 26756712
chr1 10949007 10949019 TFAP2C JASPAR yes 26756713
Genes associated with rs542274877[chr1:10949007], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More