EnhancerDB
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  3. rs542279379[chr12:50064895]
Enhancers that have rs542279379[chr12:50064895]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50062425 50070695 enh14701
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Kidney Stomach Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Lung Heart
chr12 50064771 50065019 vista13351
VISTA
Transcript factors that have rs542279379[chr12:50064895]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50064528 50065173 TCF7L2 GTRD no Colon (HCT116) 108030662
chr12 50064690 50065210 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544776
chr12 50064690 50065210 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030663
chr12 50064690 50065210 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030664
chr12 50064766 50065070 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544777
chr12 50064766 50065070 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030665
chr12 50064777 50065037 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544778
chr12 50064777 50065037 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030666
chr12 50064808 50064992 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544779
chr12 50064808 50064992 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030667
chr12 50064851 50065511 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544780
chr12 50064851 50065511 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030668
chr12 50064851 50065511 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030669
chr12 50064852 50064946 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544781
chr12 50064852 50064946 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030670
chr12 50064866 50064973 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544782
chr12 50064866 50064973 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030671
chr12 50064891 50064901 NFIA JASPAR yes 82400769
chr12 50064891 50064901 NFIA JASPAR yes 120791506
chr12 50064892 50064901 HIC2 JASPAR yes 82400770
chr12 50064892 50064901 HIC2 JASPAR yes 120791507
chr12 50064893 50064899 NFIC JASPAR yes 82400771
chr12 50064893 50064899 NFIC JASPAR yes 120791508
Genes associated with rs542279379[chr12:50064895], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More