EnhancerDB
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  3. rs542336940[chr17:75227867]
Enhancers that have rs542336940[chr17:75227867]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75227565 75234575 enh17396
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs542336940[chr17:75227867]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75226815 75228390 ZNF143 GTRD no Epithelial (MCF-7) 21789887
chr17 75226895 75228406 ZNF143 GTRD no Epithelial (MCF-7) 21789888
chr17 75227504 75228274 ZNF143 GTRD no Epithelial (MCF-7) 21789889
chr17 75227712 75228212 ZNF143 GTRD no Epithelial (MCF-7) 21789890
chr17 75227825 75228132 ZNF143 GTRD no Epithelial (MCF-7) 21789891
chr17 75227854 75227868 E2F7 JASPAR yes 56056180
chr17 75227855 75227867 E2F8 JASPAR yes 56056181
chr17 75227865 75227881 ZNF143 JASPAR yes 56056182
chr17 75227866 75227877 FOXH1 JASPAR yes 56056183
chr17 75227867 75227873 ZNF354C JASPAR yes 56056184
Genes associated with rs542336940[chr17:75227867], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More