EnhancerDB
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  3. rs542355166[chr1:8048085]
Enhancers that have rs542355166[chr1:8048085]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8046025 8056395 enh11456
Skin (Keratinocyte) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Placenta Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Neural Stem Cells (H9)
Transcript factors that have rs542355166[chr1:8048085]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8048079 8048093 ZIC1 JASPAR yes 26497007
chr1 8048079 8048094 ZIC3 JASPAR yes 26497008
chr1 8048079 8048094 ZIC4 JASPAR yes 26497009
chr1 8048080 8048090 ID4 JASPAR yes 26497010
chr1 8048080 8048090 MSC JASPAR yes 26497011
chr1 8048080 8048090 TCF3 JASPAR yes 26497012
chr1 8048080 8048090 TCF4 JASPAR yes 26497013
chr1 8048081 8048090 SNAI2 JASPAR yes 26497014
chr1 8048082 8048087 USF2 TRANSFAC yes 26497015
Genes associated with rs542355166[chr1:8048085], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More