EnhancerDB
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  3. rs542360433[chr16:1762834]
Enhancers that have rs542360433[chr16:1762834]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1759265 1774552 enh3842
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542360433[chr16:1762834]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1762830 1762840 ID4 JASPAR yes 9157392
chr16 1762830 1762840 TCF3 JASPAR yes 9157393
chr16 1762830 1762840 TCF4 JASPAR yes 9157394
chr16 1762831 1762840 SNAI2 JASPAR yes 9157395
chr16 1762832 1762837 USF2 TRANSFAC yes 9157396
Genes associated with rs542360433[chr16:1762834], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More