EnhancerDB
  1. Home
  2. SNP
  3. rs542370942[chr2:30497331]
Enhancers that have rs542370942[chr2:30497331]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 30485185 30500266 enh18412
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542370942[chr2:30497331]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 30497318 30497333 FOXP1 JASPAR yes 72751803
chr2 30497319 30497331 FOXC2 JASPAR yes 72751805
chr2 30497320 30497331 FOXC1 JASPAR yes 72751808
chr2 30497331 30497346 HNF4A JASPAR yes 72751811
Genes associated with rs542370942[chr2:30497331], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More