EnhancerDB
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  3. rs542372517[chr6:10315413]
Enhancers that have rs542372517[chr6:10315413]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 10296185 10320275 enh22999
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Placenta Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
chr6 10315279 10315501 vista50763
VISTA
Transcript factors that have rs542372517[chr6:10315413]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 10315203 10315521 TFAP2C UCSC Txn Factor no Conserved 108538289
chr6 10315310 10315435 GATA3 UCSC Txn Factor no Conserved 108538290
chr6 10315400 10315415 NFYB JASPAR yes 70305930
chr6 10315400 10315415 NFYB JASPAR yes 99818564
chr6 10315413 10315425 NHLH1 JASPAR yes 70305933
chr6 10315413 10315425 NHLH1 JASPAR yes 99818567
Genes associated with rs542372517[chr6:10315413], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More