EnhancerDB
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  3. rs542403833[chr16:27291342]
Enhancers that have rs542403833[chr16:27291342]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 27290645 27303235 enh31752
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Blood (T-cell)
Transcript factors that have rs542403833[chr16:27291342]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 27291334 27291347 NFKB1 JASPAR yes 10182617
chr16 27291334 27291347 NFKB2 JASPAR yes 10182618
chr16 27291335 27291346 NFKB1 JASPAR yes 10182619
chr16 27291336 27291346 NFKB1 JASPAR yes 10182620
chr16 27291336 27291346 RELA JASPAR yes 10182621
chr16 27291336 27291347 NFKB1 JASPAR yes 10182622
chr16 27291337 27291347 RELA JASPAR yes 10182623
chr16 27291337 27291347 REL JASPAR yes 10182624
Genes associated with rs542403833[chr16:27291342], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More