EnhancerDB
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  3. rs542438140[chr16:29621560]
Enhancers that have rs542438140[chr16:29621560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29603958 29628535 enh3968
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs542438140[chr16:29621560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29621541 29621561 RREB1 JASPAR yes 10268546
chr16 29621547 29621562 RUNX2 JASPAR yes 10268547
chr16 29621553 29621571 RARA JASPAR yes 10268550
Genes associated with rs542438140[chr16:29621560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More