EnhancerDB
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  3. rs542454138[chr12:69454106]
Enhancers that have rs542454138[chr12:69454106]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 69444332 69466895 enh14819
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Astrocyte Stomach Placenta Colon (HCT116) Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Epithelial (MCF-7)
Transcript factors that have rs542454138[chr12:69454106]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 69453216 69454123 ZNF143 GTRD no Epithelial (MCF-7) 21554663
chr12 69453216 69454123 ZNF143 GTRD no Epithelial (MCF-7) 108043852
chr12 69453255 69454211 AR GTRD no Prostate (PC-3) 21554667
chr12 69453255 69454211 AR GTRD no Prostate (PC-3) 108043857
chr12 69453475 69454125 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21554684
chr12 69453475 69454125 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108043885
Genes associated with rs542454138[chr12:69454106], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More