EnhancerDB
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  3. rs542480953[chr15:101668879]
Enhancers that have rs542480953[chr15:101668879]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 101659145 101672335 enh3838
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542480953[chr15:101668879]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 101668329 101668979 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21683213
chr15 101668388 101668904 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21683215
chr15 101668874 101668885 HOXC11 JASPAR yes 25969116
chr15 101668874 101668885 HOXC12 JASPAR yes 25969117
chr15 101668874 101668885 HOXC13 JASPAR yes 25969118
chr15 101668874 101668885 HOXD12 JASPAR yes 25969119
chr15 101668874 101668889 MYBL2 JASPAR yes 25969120
chr15 101668875 101668885 HOXC10 JASPAR yes 25969121
chr15 101668875 101668885 HOXD11 JASPAR yes 25969122
Genes associated with rs542480953[chr15:101668879], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More