EnhancerDB
  1. Home
  2. SNP
  3. rs542481963[chr5:171597412]
Enhancers that have rs542481963[chr5:171597412]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs542481963[chr5:171597412]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171597410 171597414 H1TF2 TRANSFAC yes 67770953
chr5 171597410 171597414 NFE TRANSFAC yes 67770954
chr5 171597410 171597414 SRF TRANSFAC yes 67770955
chr5 171597411 171597423 PBX1 JASPAR yes 67770956
Genes associated with rs542481963[chr5:171597412], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More