EnhancerDB
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  3. rs542493166[chr19:2491820]
Enhancers that have rs542493166[chr19:2491820]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2481141 2509475 enh4958
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542493166[chr19:2491820]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2490428 2492348 ZNF143 GTRD no Epithelial (MCF-7) 21835544
chr19 2490457 2492100 AR GTRD no Prostate (PC-3) 21835545
chr19 2490539 2491965 ZNF274 GTRD no Cervix (HeLa-S3) 21835546
chr19 2490555 2491954 ZNF274 GTRD no Cervix (HeLa-S3) 21835547
chr19 2490559 2492025 ZNF274 GTRD no Cervix (HeLa-S3) 21835548
chr19 2490573 2492184 ZNF274 GTRD no Cervix (HeLa-S3) 21835549
chr19 2490661 2492021 ZNF274 GTRD no Cervix (HeLa-S3) 21835552
chr19 2490671 2492011 ZNF274 GTRD no Cervix (HeLa-S3) 21835553
chr19 2490734 2492040 ZNF274 GTRD no Cervix (HeLa-S3) 21835556
chr19 2490841 2491959 ZNF143 GTRD no Epithelial (MCF-7) 21835559
chr19 2490850 2491832 ZNF143 GTRD no Epithelial (MCF-7) 21835561
chr19 2490863 2492083 ZNF143 GTRD no Epithelial (MCF-7) 21835562
chr19 2490875 2491865 ZNF143 GTRD no Epithelial (MCF-7) 21835564
chr19 2490888 2491978 ZNF143 GTRD no Epithelial (MCF-7) 21835565
chr19 2490894 2491842 ZNF143 GTRD no Epithelial (MCF-7) 21835566
chr19 2490913 2492002 ZNF274 GTRD no Cervix (HeLa-S3) 21835568
chr19 2490921 2492017 ERG GTRD no Prostate (RWPE1) 21835569
chr19 2490954 2491867 ZNF143 GTRD no Epithelial (MCF-7) 21835570
chr19 2490956 2491934 MYOD GTRD no Muscle (Myoblast) 21835571
chr19 2490979 2491893 ZNF274 GTRD no Liver (HepG2) 21835573
chr19 2490989 2491949 ZNF274 GTRD no Cervix (HeLa-S3) 21835574
chr19 2491003 2491956 ZNF143 GTRD no Epithelial (MCF-7) 21835577
chr19 2491010 2492020 ZNF143 GTRD no Epithelial (MCF-7) 21835578
chr19 2491021 2492019 ZNF143 GTRD no Epithelial (MCF-7) 21835579
chr19 2491025 2491911 ZNF274 GTRD no Cervix (HeLa-S3) 21835580
chr19 2491025 2492165 ZNF143 GTRD no Epithelial (MCF-7) 21835581
chr19 2491028 2491902 ZNF274 GTRD no Cervix (HeLa-S3) 21835582
chr19 2491036 2491911 ZNF143 GTRD no Epithelial (MCF-7) 21835586
chr19 2491041 2492147 ZNF143 GTRD no Epithelial (MCF-7) 21835588
chr19 2491041 2492164 ZNF143 GTRD no Epithelial (MCF-7) 21835589
chr19 2491061 2491902 ZNF143 GTRD no Epithelial (MCF-7) 21835592
chr19 2491087 2491978 ZNF143 GTRD no Epithelial (MCF-7) 21835596
chr19 2491088 2491854 ZNF274 GTRD no Cervix (HeLa-S3) 21835597
chr19 2491094 2491939 ZNF143 GTRD no Epithelial (MCF-7) 21835599
chr19 2491102 2492015 ZNF143 GTRD no Epithelial (MCF-7) 21835601
chr19 2491116 2491868 ZNF274 GTRD no Cervix (HeLa-S3) 21835604
chr19 2491125 2491984 ZNF274 GTRD no Cervix (HeLa-S3) 21835606
chr19 2491156 2491938 ZNF274 GTRD no Cervix (HeLa-S3) 21835610
chr19 2491196 2491904 ZNF143 GTRD no Epithelial (MCF-7) 21835612
chr19 2491247 2491971 ZNF274 GTRD no Liver (HepG2) 21835615
chr19 2491309 2492011 ZNF274 GTRD no Liver (HepG2) 21835619
chr19 2491329 2491861 ZNF274 GTRD no Cervix (HeLa-S3) 21835622
chr19 2491365 2491992 ZNF143 GTRD no Epithelial (MCF-7) 21835625
chr19 2491370 2491976 ZNF274 GTRD no Liver (HepG2) 21835627
chr19 2491379 2491945 ZNF143 GTRD no Epithelial (MCF-7) 21835629
chr19 2491396 2491950 ZNF274 GTRD no Bone Marrow (K562) 21835630
chr19 2491437 2491939 ZNF274 GTRD no Liver (HepG2) 21835631
chr19 2491454 2491989 ZNF143 GTRD no Epithelial (MCF-7) 21835632
chr19 2491460 2491968 ZNF143 GTRD no Epithelial (MCF-7) 21835633
chr19 2491529 2491849 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835635
chr19 2491541 2491881 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835637
chr19 2491647 2491920 ZNF143 GTRD no Epithelial (MCF-7) 21835641
Genes associated with rs542493166[chr19:2491820], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More