EnhancerDB
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  3. rs542493992[chr1:38560305]
Enhancers that have rs542493992[chr1:38560305]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 38546605 38564055 enh49714
Brain (SK-N-MC) Large Intestine Muscle (A673) Pancreas Neural Stem Cells (H9)
chr1 38560194 38561606 vista26
VISTA
Transcript factors that have rs542493992[chr1:38560305]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 38557880 38560819 ZNF274 GTRD no Blood (GM12878) 107686497
chr1 38560290 38560305 FOXP1 JASPAR yes 28197195
chr1 38560290 38560305 FOXP1 JASPAR yes 71125592
chr1 38560293 38560305 FOXI1 JASPAR yes 28197197
chr1 38560293 38560305 FOXI1 JASPAR yes 71125594
chr1 38560294 38560309 SCRT1 JASPAR yes 28197198
chr1 38560294 38560309 SCRT1 JASPAR yes 71125595
chr1 38560301 38560309 MGA JASPAR yes 28197201
chr1 38560301 38560309 TBX15 JASPAR yes 28197202
chr1 38560301 38560309 TBX1 JASPAR yes 28197203
chr1 38560301 38560309 TBX4 JASPAR yes 28197204
chr1 38560301 38560309 TBX5 JASPAR yes 28197205
chr1 38560301 38560309 MGA JASPAR yes 71125598
chr1 38560301 38560309 TBX15 JASPAR yes 71125599
chr1 38560301 38560309 TBX1 JASPAR yes 71125600
chr1 38560301 38560309 TBX4 JASPAR yes 71125601
chr1 38560301 38560309 TBX5 JASPAR yes 71125602
Genes associated with rs542493992[chr1:38560305], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More