EnhancerDB
  1. Home
  2. SNP
  3. rs542509938[chr2:96899209]
Enhancers that have rs542509938[chr2:96899209]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 96897522 96913735 enh5714
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs542509938[chr2:96899209]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 96899200 96899214 RXRB JASPAR yes 75591998
chr2 96899200 96899214 RXRG JASPAR yes 75591999
chr2 96899200 96899215 NR2C2 JASPAR yes 75592000
Genes associated with rs542509938[chr2:96899209], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More