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- rs542524381[chr19:3669160]
Enhancers that have rs542524381[chr19:3669160]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
3663945 |
3677395 |
enh17868 |
|
|
Transcript factors that have rs542524381[chr19:3669160]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
3666575
|
3674330
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108368114
|
|
|
chr19
|
3666575
|
3674330
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108368115
|
|
|
chr19
|
3668923
|
3672695
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108368116
|
|
|
chr19
|
3668923
|
3672695
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108368117
|
|
|
chr19
|
3669044
|
3672462
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108368118
|
|
|
chr19
|
3669044
|
3672462
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108368119
|
|
|
chr19
|
3669148
|
3669167
|
CTCF
|
JASPAR
|
yes
|
|
112142889
|
|
|
chr19
|
3669149
|
3669161
|
NHLH1
|
JASPAR
|
yes
|
|
112142890
|
|
|
chr19
|
3669150
|
3669160
|
NHLH1
|
JASPAR
|
yes
|
|
112142891
|
|
Genes associated with rs542524381[chr19:3669160], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |