EnhancerDB
  1. Home
  2. SNP
  3. rs542560871[chr5:167125690]
Enhancers that have rs542560871[chr5:167125690]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 167123051 167130675 enh22776
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9)
Transcript factors that have rs542560871[chr5:167125690]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 167125672 167125692 RREB1 JASPAR yes 67529138
chr5 167125672 167125693 IRF1 JASPAR yes 67529139
chr5 167125673 167125694 IRF1 JASPAR yes 67529140
chr5 167125678 167125699 IRF1 JASPAR yes 67529141
chr5 167125679 167125694 FOXP1 JASPAR yes 67529143
chr5 167125679 167125700 IRF1 JASPAR yes 67529144
chr5 167125680 167125691 FOXP2 JASPAR yes 67529145
chr5 167125680 167125692 FOXC2 JASPAR yes 67529146
chr5 167125680 167125695 STAT2 JASPAR yes 67529147
chr5 167125680 167125701 IRF1 JASPAR yes 67529148
chr5 167125681 167125696 FOXP1 JASPAR yes 67529149
chr5 167125681 167125702 IRF1 JASPAR yes 67529150
chr5 167125682 167125703 IRF1 JASPAR yes 67529151
chr5 167125683 167125698 FOXP1 JASPAR yes 67529152
chr5 167125683 167125704 IRF1 JASPAR yes 67529153
chr5 167125684 167125699 FOXP1 JASPAR yes 67529154
chr5 167125684 167125705 IRF1 JASPAR yes 67529155
chr5 167125685 167125700 FOXP1 JASPAR yes 67529156
chr5 167125685 167125706 IRF1 JASPAR yes 67529157
chr5 167125686 167125701 FOXP1 JASPAR yes 67529158
chr5 167125686 167125707 IRF1 JASPAR yes 67529159
chr5 167125687 167125702 FOXP1 JASPAR yes 67529160
chr5 167125688 167125703 FOXP1 JASPAR yes 67529161
chr5 167125689 167125704 FOXP1 JASPAR yes 67529162
chr5 167125690 167125705 FOXP1 JASPAR yes 67529163
Genes associated with rs542560871[chr5:167125690], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More