EnhancerDB
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  3. rs542564282[chr17:27476748]
Enhancers that have rs542564282[chr17:27476748]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27463605 27492255 enh4319
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542564282[chr17:27476748]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27475522 27476804 POLR2A UCSC Txn Factor no Conserved 108246585
chr17 27475823 27476927 ZNF274 GTRD no Bone Marrow (K562) 21748924
chr17 27475823 27476927 ZNF274 GTRD no Bone Marrow (K562) 108246620
chr17 27476743 27476758 TFAP2A JASPAR yes 53717733
chr17 27476746 27476758 TFAP2A JASPAR yes 53717734
chr17 27476746 27476760 EBF1 JASPAR yes 53717735
chr17 27476746 27476761 TFAP2A JASPAR yes 53717736
chr17 27476747 27476756 TFAP2A JASPAR yes 53717737
Genes associated with rs542564282[chr17:27476748], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More