EnhancerDB
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  3. rs542571623[chr17:74195232]
Enhancers that have rs542571623[chr17:74195232]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 74173985 74207855 enh48066
Bone Marrow (K562) Brain (SK-N-SH) Large Intestine Blood (T-cell) Liver Blood (GM12878) Stomach Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs542571623[chr17:74195232]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 74195121 74197298 TCF7L2 GTRD no Colon (HCT116) 21788224
chr17 74195121 74197298 TCF7L2 GTRD no Colon (HCT116) 108295080
chr17 74195225 74195239 TCF7L2 JASPAR yes 55984703
chr17 74195225 74195240 LEF1 JASPAR yes 55984704
chr17 74195226 74195240 RXRG JASPAR yes 55984705
Genes associated with rs542571623[chr17:74195232], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More