EnhancerDB
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  3. rs542580349[chr1:113184508]
Enhancers that have rs542580349[chr1:113184508]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113174365 113185519 enh568
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (A549) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Blood (T-cell) Stomach
Transcript factors that have rs542580349[chr1:113184508]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113184505 113184520 FOXP1 JASPAR yes 31584465
chr1 113184506 113184521 FOXP1 JASPAR yes 31584466
chr1 113184507 113184522 FOXP1 JASPAR yes 31584467
chr1 113184507 113184528 IRF1 JASPAR yes 31584468
chr1 113184508 113184523 FOXP1 JASPAR yes 31584469
chr1 113184508 113184529 IRF1 JASPAR yes 31584470
Genes associated with rs542580349[chr1:113184508], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More