EnhancerDB
  1. Home
  2. SNP
  3. rs542599503[chr1:41897554]
Enhancers that have rs542599503[chr1:41897554]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41893945 41902175 enh26652
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Bone (Osteoblast) Stomach Thyroid Breast Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Heart
Transcript factors that have rs542599503[chr1:41897554]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41897539 41897558 CTCF JASPAR yes 28388941
chr1 41897542 41897556 ZIC1 JASPAR yes 28388942
chr1 41897542 41897557 ZIC3 JASPAR yes 28388943
chr1 41897542 41897557 ZIC4 JASPAR yes 28388944
chr1 41897543 41897562 REST JASPAR yes 28388945
Genes associated with rs542599503[chr1:41897554], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More