EnhancerDB
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  3. rs542645484[chr17:79966267]
Enhancers that have rs542645484[chr17:79966267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79955085 79966579 enh17449
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs542645484[chr17:79966267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79966261 79966271 SP1 JASPAR yes 56346286
chr17 79966267 79966272 SP1 TRANSFAC yes 56346287
chr17 79966267 79966281 PLAG1 JASPAR yes 56346288
Genes associated with rs542645484[chr17:79966267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More