EnhancerDB
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  3. rs542655509[chr12:105128560]
Enhancers that have rs542655509[chr12:105128560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 105125485 105139216 enh14950
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs542655509[chr12:105128560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 105128555 105128564 CDX1 JASPAR yes 123412595
chr12 105128555 105128566 CDX2 JASPAR yes 123412596
Genes associated with rs542655509[chr12:105128560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More