EnhancerDB
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  3. rs542664857[chr18:51788047]
Enhancers that have rs542664857[chr18:51788047]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 51771109 51790535 enh4844
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs542664857[chr18:51788047]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 51788044 51788059 FOXP1 JASPAR yes 110713224
chr18 51788045 51788060 FOXP1 JASPAR yes 110713225
chr18 51788046 51788061 FOXP1 JASPAR yes 110713226
chr18 51788046 51788067 IRF1 JASPAR yes 110713227
chr18 51788047 51788062 FOXP1 JASPAR yes 110713228
chr18 51788047 51788068 IRF1 JASPAR yes 110713229
Genes associated with rs542664857[chr18:51788047], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More