EnhancerDB
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  3. rs542677342[chr1:23962287]
Enhancers that have rs542677342[chr1:23962287]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23931559 23968435 enh128
Bone Marrow (K562) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542677342[chr1:23962287]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23962278 23962298 RREB1 JASPAR yes 27451248
chr1 23962279 23962293 GLIS3 JASPAR yes 27451249
chr1 23962279 23962300 ZNF263 JASPAR yes 27451250
chr1 23962282 23962287 SP1 TRANSFAC yes 27451251
chr1 23962286 23962301 NR2C2 JASPAR yes 27451252
chr1 23962287 23962301 RXRB JASPAR yes 27451253
chr1 23962287 23962301 RXRG JASPAR yes 27451254
Genes associated with rs542677342[chr1:23962287], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More