EnhancerDB
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  3. rs542687788[chr2:38698745]
Enhancers that have rs542687788[chr2:38698745]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38686664 38704695 enh48250
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Ovary Blood (OCI-LY7) Stomach Colon (HCT116) Thyroid Lung (PC-9) Breast Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs542687788[chr2:38698745]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38698739 38698760 IRF1 JASPAR yes 73145278
chr2 38698740 38698761 IRF1 JASPAR yes 73145279
chr2 38698744 38698759 FOXP1 JASPAR yes 73145280
chr2 38698745 38698760 FOXP1 JASPAR yes 73145281
chr2 38698745 38698766 IRF1 JASPAR yes 73145282
Genes associated with rs542687788[chr2:38698745], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More