EnhancerDB
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  3. rs542689[chr12:118786661]
Enhancers that have rs542689[chr12:118786661]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 118762905 118786895 enh2629
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Thyroid Blood (Karpas-422) Spleen Stomach
Transcript factors that have rs542689[chr12:118786661]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 118786640 118786661 IRF1 JASPAR yes 124100225
chr12 118786644 118786665 IRF1 JASPAR yes 124100228
chr12 118786645 118786666 IRF1 JASPAR yes 124100230
chr12 118786646 118786667 IRF1 JASPAR yes 124100231
chr12 118786647 118786662 FOXP1 JASPAR yes 124100232
chr12 118786647 118786668 IRF1 JASPAR yes 124100233
chr12 118786648 118786669 IRF1 JASPAR yes 124100234
chr12 118786649 118786664 FOXP1 JASPAR yes 124100235
chr12 118786649 118786670 IRF1 JASPAR yes 124100236
chr12 118786650 118786665 FOXP1 JASPAR yes 124100237
chr12 118786650 118786671 IRF1 JASPAR yes 124100238
chr12 118786651 118786666 FOXP1 JASPAR yes 124100239
chr12 118786652 118786667 FOXP1 JASPAR yes 124100240
chr12 118786653 118786668 FOXP1 JASPAR yes 124100241
chr12 118786654 118786669 FOXP1 JASPAR yes 124100242
chr12 118786655 118786670 FOXP1 JASPAR yes 124100243
chr12 118786656 118786671 FOXP1 JASPAR yes 124100244
chr12 118786657 118786672 FOXP1 JASPAR yes 124100245
chr12 118786658 118786673 FOXP1 JASPAR yes 124100246
chr12 118786661 118786676 MEF2C JASPAR yes 124100247
Genes associated with rs542689[chr12:118786661], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More