EnhancerDB
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  3. rs542691447[chr1:116848157]
Enhancers that have rs542691447[chr1:116848157]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542691447[chr1:116848157]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116848088 116848534 ZNF274 GTRD no Bone Marrow (K562) 21331922
chr1 116848147 116848157 HOXD11 JASPAR yes 31791863
chr1 116848147 116848158 HOXC12 JASPAR yes 31791864
chr1 116848150 116848168 NR3C1 JASPAR yes 31791865
chr1 116848151 116848172 IRF1 JASPAR yes 31791866
chr1 116848153 116848168 PRDM1 JASPAR yes 31791867
chr1 116848153 116848168 STAT2 JASPAR yes 31791868
chr1 116848154 116848168 STAT1 JASPAR yes 31791869
chr1 116848156 116848171 FOXP1 JASPAR yes 31791870
Genes associated with rs542691447[chr1:116848157], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More