EnhancerDB
  1. Home
  2. SNP
  3. rs542755469[chr17:79017073]
Enhancers that have rs542755469[chr17:79017073]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79008825 79027145 enh17433
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs542755469[chr17:79017073]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79017065 79017075 GABPA JASPAR yes 56300376
chr17 79017067 79017073 ETS1 JASPAR yes 56300377
chr17 79017067 79017073 SPI1 JASPAR yes 56300378
Genes associated with rs542755469[chr17:79017073], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More