EnhancerDB
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  3. rs542765356[chr16:1338318]
Enhancers that have rs542765356[chr16:1338318]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542765356[chr16:1338318]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1336565 1338880 ZNF143 GTRD no Epithelial (MCF-7) 21684534
chr16 1337318 1340439 ZNF143 GTRD no Epithelial (MCF-7) 21684538
chr16 1337318 1340439 ZNF143 GTRD no Epithelial (MCF-7) 108171312
chr16 1337326 1339050 TCF7L2 GTRD no Colon (HCT116) 21684539
chr16 1337361 1339591 TCF7L2 GTRD no Colon (HCT116) 21684541
chr16 1337361 1339591 TCF7L2 GTRD no Colon (HCT116) 108171313
chr16 1337400 1339113 ZNF143 GTRD no Epithelial (MCF-7) 21684542
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 21684544
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171314
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171315
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171316
chr16 1337589 1339388 ZNF143 GTRD no Epithelial (MCF-7) 21684546
chr16 1337589 1339388 ZNF143 GTRD no Epithelial (MCF-7) 108171317
chr16 1337592 1339162 ZNF143 GTRD no Epithelial (MCF-7) 21684547
chr16 1337630 1339134 TCF7L2 GTRD no Colon (HCT116) 21684548
chr16 1337633 1339066 ZNF143 GTRD no Epithelial (MCF-7) 21684549
chr16 1337681 1338751 ZNF274 GTRD no Cervix (HeLa-S3) 21684551
chr16 1337797 1338682 ZNF143 GTRD no Epithelial (MCF-7) 21684552
chr16 1337802 1338829 ZNF143 GTRD no Epithelial (MCF-7) 21684553
chr16 1337804 1339504 TCF7L2 GTRD no Colon (HCT116) 21684554
chr16 1337804 1339504 TCF7L2 GTRD no Colon (HCT116) 108171318
chr16 1337819 1338708 TCF7L2 GTRD no Colon (HCT116) 21684555
chr16 1337839 1338601 ZNF274 GTRD no Liver (HepG2) 21684556
chr16 1337842 1338496 ZNF274 GTRD no Liver (HepG2) 21684557
chr16 1337844 1338634 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21684558
chr16 1337869 1338768 ZNF274 GTRD no Cervix (HeLa-S3) 21684559
chr16 1337881 1338974 ZNF143 GTRD no Epithelial (MCF-7) 21684560
chr16 1337900 1338694 ZNF274 GTRD no Liver (HepG2) 21684561
chr16 1337944 1338612 ZNF143 GTRD no Epithelial (MCF-7) 21684562
chr16 1338032 1338749 TCF7L2 GTRD no Colon (HCT116) 21684563
chr16 1338036 1338474 ZNF143 GTRD no Epithelial (MCF-7) 21684564
chr16 1338043 1338647 ZNF274 GTRD no Liver (HepG2) 21684565
chr16 1338056 1338758 TCF7L2 GTRD no Colon (HCT116) 21684566
chr16 1338061 1338463 ZNF274 GTRD no Cervix (HeLa-S3) 21684567
chr16 1338088 1338803 ZNF143 GTRD no Epithelial (MCF-7) 21684568
chr16 1338100 1338579 ZNF274 GTRD no Liver (HepG2) 21684569
chr16 1338125 1338460 ZNF274 GTRD no Liver (HepG2) 21684570
chr16 1338135 1339387 TCF7L2 GTRD no Colon (HCT116) 21684571
chr16 1338135 1339387 TCF7L2 GTRD no Colon (HCT116) 108171319
chr16 1338152 1338468 ZNF274 GTRD no Liver (HepG2) 21684572
chr16 1338157 1338424 ZNF143 GTRD no Epithelial (MCF-7) 21684573
chr16 1338190 1338521 ZNF274 GTRD no Liver (HepG2) 21684574
chr16 1338307 1338320 SMAD2 JASPAR yes 9148259
Genes associated with rs542765356[chr16:1338318], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More