EnhancerDB
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  3. rs542772165[chr9:116344425]
Enhancers that have rs542772165[chr9:116344425]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 116325685 116352877 enh25925
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs542772165[chr9:116344425]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 116344416 116344429 SMAD2 JASPAR yes 86426889
chr9 116344418 116344432 ZIC1 JASPAR yes 86426890
chr9 116344420 116344433 ZBTB18 JASPAR yes 86426891
chr9 116344421 116344433 NHLH1 JASPAR yes 86426892
chr9 116344422 116344432 NHLH1 JASPAR yes 86426893
Genes associated with rs542772165[chr9:116344425], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More