EnhancerDB
  1. Home
  2. SNP
  3. rs542786793[chr19:4575090]
Enhancers that have rs542786793[chr19:4575090]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4562990 4590495 enh17872
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Spleen Uterus Stomach
Transcript factors that have rs542786793[chr19:4575090]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4573855 4576766 TCF7L2 GTRD no Colon (HCT116) 21841547
chr19 4573855 4576766 TCF7L2 GTRD no Colon (HCT116) 108372345
chr19 4574180 4576870 ZNF274 GTRD no Bone Marrow (K562) 108372346
chr19 4574418 4575746 ZNF274 GTRD no Bone Marrow (K562) 108372347
chr19 4574456 4575772 TCF7L2 GTRD no Colon (HCT116) 21841548
chr19 4574456 4575772 TCF7L2 GTRD no Colon (HCT116) 108372348
chr19 4574496 4575985 TCF7L2 GTRD no Colon (HCT116) 21841549
chr19 4574496 4575985 TCF7L2 GTRD no Colon (HCT116) 108372349
chr19 4574502 4577051 ZNF274 GTRD no Cervix (HeLa-S3) 21841550
chr19 4574502 4577051 ZNF274 GTRD no Cervix (HeLa-S3) 108372350
chr19 4574522 4576067 TCF7L2 GTRD no Colon (HCT116) 21841551
chr19 4574522 4576067 TCF7L2 GTRD no Colon (HCT116) 108372351
chr19 4574554 4575742 ZNF274 GTRD no Cervix (HeLa-S3) 21841552
chr19 4574554 4575742 ZNF274 GTRD no Cervix (HeLa-S3) 108372352
chr19 4574560 4575857 ZNF274 GTRD no Bone Marrow (K562) 108372353
chr19 4574589 4576774 TCF7L2 GTRD no Colon (HCT116) 21841553
chr19 4574589 4576774 TCF7L2 GTRD no Colon (HCT116) 108372354
chr19 4574602 4577604 ZNF274 GTRD no Cervix (HeLa-S3) 21841554
chr19 4574602 4577604 ZNF274 GTRD no Cervix (HeLa-S3) 108372355
chr19 4574609 4575491 ZNF274 GTRD no Bone Marrow (K562) 108372356
chr19 4574619 4575162 TCF7L2 GTRD no Colon (HCT116) 21841555
chr19 4574619 4576733 TCF7L2 GTRD no Colon (HCT116) 21841556
chr19 4574619 4576733 TCF7L2 GTRD no Colon (HCT116) 108372357
chr19 4574631 4576993 TCF7L2 GTRD no Colon (HCT116) 21841557
chr19 4574631 4576993 TCF7L2 GTRD no Colon (HCT116) 108372358
chr19 4574747 4577969 ZBTB33 GTRD no Lung (A549) 108372359
chr19 4574827 4577735 ZNF274 GTRD no Cervix (HeLa-S3) 21841558
chr19 4574827 4577735 ZNF274 GTRD no Cervix (HeLa-S3) 108372360
chr19 4574858 4577847 ZNF274 GTRD no Bone Marrow (K562) 108372361
chr19 4574875 4576573 ZBTB33 GTRD no Lung (A549) 108372362
chr19 4574904 4577765 ZBTB33 GTRD no Lung (A549) 108372363
chr19 4574958 4576496 TCF7L2 GTRD no Colon (HCT116) 21841559
chr19 4574958 4576496 TCF7L2 GTRD no Colon (HCT116) 108372364
chr19 4574971 4576737 ZBTB33 GTRD no Lung (A549) 108372365
chr19 4574982 4576573 ZBTB33 GTRD no Lung (A549) 108372366
chr19 4575004 4575772 ZBTB33 GTRD no Lung (A549) 108372367
chr19 4575004 4576364 ZBTB33 GTRD no Lung (A549) 108372368
chr19 4575013 4577766 ZNF274 GTRD no Bone Marrow (K562) 108372369
chr19 4575014 4576013 ZNF274 GTRD no Cervix (HeLa-S3) 21841560
chr19 4575014 4576013 ZNF274 GTRD no Cervix (HeLa-S3) 108372370
chr19 4575028 4577707 ZNF274 GTRD no Bone Marrow (K562) 108372371
chr19 4575030 4575914 ZNF274 GTRD no Cervix (HeLa-S3) 21841561
chr19 4575030 4575914 ZNF274 GTRD no Cervix (HeLa-S3) 108372372
chr19 4575051 4576860 ZNF274 GTRD no Bone Marrow (K562) 108372373
chr19 4575054 4575941 ZBTB33 GTRD no Lung (A549) 108372374
chr19 4575058 4577662 ZNF143 GTRD no Epithelial (MCF-7) 108372375
chr19 4575061 4577082 ZNF274 GTRD no Cervix (HeLa-S3) 21841562
chr19 4575061 4577082 ZNF274 GTRD no Cervix (HeLa-S3) 108372376
chr19 4575067 4575972 ZBTB33 GTRD no Brain (SK-N-SH) 108372377
chr19 4575067 4577873 ZNF143 GTRD no Epithelial (MCF-7) 108372378
chr19 4575068 4577693 ZNF274 GTRD no Bone Marrow (K562) 108372379
chr19 4575088 4575531 TCF7L2 GTRD no Colon (HCT116) 21841563
chr19 4575088 4575531 TCF7L2 GTRD no Colon (HCT116) 108372380
Genes associated with rs542786793[chr19:4575090], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More