EnhancerDB
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  3. rs542789275[chr1:200259458]
Enhancers that have rs542789275[chr1:200259458]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs542789275[chr1:200259458]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200258197 200259776 ZNF143 GTRD no Epithelial (MCF-7) 21362764
chr1 200259258 200259757 ZNF274 GTRD no Liver (HepG2) 21362782
chr1 200259286 200259942 ZNF274 GTRD no Liver (HepG2) 21362783
chr1 200259334 200259954 ZNF274 GTRD no Liver (HepG2) 21362784
chr1 200259445 200259709 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21362785
Genes associated with rs542789275[chr1:200259458], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More