EnhancerDB
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  3. rs542796666[chr2:30486676]
Enhancers that have rs542796666[chr2:30486676]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 30485185 30500266 enh18412
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542796666[chr2:30486676]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 30486658 30486679 IRF1 JASPAR yes 72750279
chr2 30486662 30486683 IRF1 JASPAR yes 72750280
chr2 30486663 30486678 FOXP1 JASPAR yes 72750281
chr2 30486663 30486684 IRF1 JASPAR yes 72750282
chr2 30486664 30486685 IRF1 JASPAR yes 72750283
chr2 30486668 30486683 FOXP1 JASPAR yes 72750284
chr2 30486668 30486689 IRF1 JASPAR yes 72750285
chr2 30486669 30486690 IRF1 JASPAR yes 72750286
chr2 30486670 30486685 FOXP1 JASPAR yes 72750287
chr2 30486670 30486685 LEF1 JASPAR yes 72750288
chr2 30486670 30486691 IRF1 JASPAR yes 72750289
chr2 30486674 30486695 IRF1 JASPAR yes 72750290
chr2 30486675 30486690 FOXP1 JASPAR yes 72750291
chr2 30486675 30486696 IRF1 JASPAR yes 72750292
chr2 30486676 30486697 IRF1 JASPAR yes 72750293
Genes associated with rs542796666[chr2:30486676], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More